Public Data
11 samples
Bulk RNA-seq of LDN from GPP, PV and HC
Accession: SRP357416
Published: 2023
primary cells
blood
normal
Public Data
73 samples
Diabetes-associated breast cancer has a distinct transcriptome and metabolome and shows DNA repair deficiency [Breast Tumors]
Accession: SRP375021
Published: 2023 in JCI Insight
primary tissue
breast
breast cancer, breast cancer, ...
Public Data
8 samples
Diabetes-associated breast cancer has a distinct transcriptome and metabolome and shows DNA repair deficiency [RNAseq-Hs578T]
Accession: SRP447201
Published: 2023 in JCI Insight
cell line
other
breast
breast cancer
Public Data
16 samples
Diabetes-associated breast cancer has a distinct transcriptome and metabolome and shows DNA repair deficiency [RNAseq-MDA-MB-231_and_MDA-MB-468]
Accession: SRP447204
Published: 2023 in JCI Insight
cell line
other
breast
breast cancer
Public Data
2 samples
ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry [RNA-seq]
Accession: SRP447864
Published: 2023 in Cell Rep
cell line
gene, gene: crispr
uterus
cervical adenocarcinoma
Public Data
11 samples
Human histone H1 variants impact splicing outcome by controlling RNA polymerase II elongation rate [RNA-seq]
Accession: SRP429455
Published: 2023 in Mol Cell
cell line
gene, gene: crispr, ...
kidney
Public Data
6 samples
PARP1 inhibition at R loops selectively kills spliceosome mutant leukemias by triggering transcription-replication conflicts
Accession: SRP458228
Published: 2023
cell line
gene, gene: overexpression
pleural effusion
chronic myelogenous leukemia, BCR-ABL1 positive
Public Data
2 samples
WES of 3 Relapsed ALK+ ALCL PDX
Accession: SRP470535
Published: 2023
primary tissue, xenograft
anaplastic large cell lymphoma
Public Data
6 samples
PRMT1 inhibition activates the interferon pathway to potentiate antitumor immunity and enhance checkpoint blockade efficacy in melanoma
Accession: SRP453768
Published: 2023
cell line
gene, gene: shrna
zone of skin
melanoma
Public Data
70 samples
Chromatin accessibility and pioneer factor FOXA1 restrict glucocorticoid receptor action in prostate cancer (RNA-Seq)
Accession: SRP400955
Published: 2023 in Nucleic Acids Res
cell line
bioactive entity, gene, ...
prostate gland
prostate cancer
Public Data
57 samples
Genomic, transcriptomic, functional, and mechanistic characterization of rhabdomyosarcoma with FUS-TFCP2 or EWSR1-TFCP2 fusions (RNA-Seq)
Accession: SRP420333
Published: 2023 in Nat Commun
cell line
gene, gene: overexpression
bone marrow, breast
Public Data
18 samples
An epigenetic barrier in neural progenitor cells and early neurons set the timing of human neuronal maturation [RNA-seq]
Accession: SRP358126
Published: 2023 in Nature
cell line, primary cells
in_vitro_differentiated, neuron_in_vitro_differentiated, ...
Public Data
6 samples
The role of ALDH1B1 in human SW480 colon cancer cells
Accession: SRP436030
Published: 2023 in Chem Biol Interact
cell line
gene, gene: shrna
colon
malignant colon neoplasm
Public Data
6 samples
RNA-seq in human MDA-MB-231 cells with CRISPR knockout of ITGAV
Accession: SRP435234
Published: 2023 in Nat Struct Mol Biol
cell line
gene, gene: crispr
breast
breast cancer
Public Data
30 samples
Pyrvinium pamoate targets to multiple vulnerabilities of Merkel cell carcinoma
Accession: SRP432713
Published: 2023 in bioRxiv
cell line
bioactive entity
Merkel cell
cutaneous neuroendocrine carcinoma