Public Data
2 samples
Transcriptomic profiling of a glioblastoma multiforme patient with matched control brain tissue
Accession: SRP009144
Published: 2011
primary tissue
brain
glioblastoma
Public Data
5 samples
Identification of gene fusion transcripts by transcriptome sequencing in BRCA1-mutated breast cancers and cell lines
Accession: SRP008746
Published: 2011 in BMC Med Genomics
cell line
breast, breast, ...
breast cancer
Public Data
18 samples
The evolution of gene expression levels in mammalian organs
Accession: SRP007412
Published: 2011 in Nature
primary tissue
cerebellum, frontal cortex, ...
Public Data
15 samples
Transposon-based construction of strand-specific RNA-seq libraries
Accession: SRP008331
Published: 2011 in Genome Res
cell line, other
endometrium
endometrial cancer
Public Data
5 samples
RNA-seq reveals novel transcriptome of genes and their isoforms in human pulmonary microvascular endothelial cells treated with Thrombin
Accession: SRP008482
Published: 2011
primary cells
bioactive entity
lung
Public Data
12 samples
Transciptome profiling of ovarian cancer cell lines
Accession: ERP000710
Published: 2011
cell line
ovary
ovarian carcinoma
Public Data
2 samples
Gene expression analysis of breast cancer (HCC1954) and normal breast cells (HMEC)
Accession: SRP006726
Published: 2011 in Genome Res
cell line, primary cells
breast
breast cancer
Public Data
3 samples
An Alternative Splicing Switch Regulates Embryonic Stem Cell Pluripotency and Reprogramming [RNA-Seq]
Accession: SRP008225
Published: 2011 in Cell
cell line
gene, gene: sirna
blood
Sezary syndrome
Public Data
1 sample
Genomic analyses of the RNA binding protein Hu Antigen R (HuR) identify a complex network of target genes and novel characteristics of its binding sites
Accession: SRP008069
Published: 2011 in J Biol Chem
cell line
uterine cervix
cervical cancer
Public Data
3 samples
ChimeraScan: A tool for identifying chimeric transcription in sequencing data
Accession: SRP006719
Published: 2011
cell line
breast, prostate gland
breast cancer, prostate cancer
Public Data
9 samples
Integrative Annotation of Human Large Intergenic Non-Coding RNAs Reveals Global Properties and Specific Subclasses
Accession: SRP007494
Published: 2011 in Genes Dev
cell line, primary cells, ...
brain, liver, ...
cervical cancer
Public Data
4 samples
Determination of transcript abundance before and after serum induction in human HCT-116 colon cancer cell line.
Accession: SRP007506
Published: 2011 in Genes Dev
cell line
bioactive entity
colon
malignant colon neoplasm
Public Data
9 samples
Unstressed HeLa cells and ELAVL1/HuR knock down conditions: polyA RNA-Seq, small RNA-Seq, and PAR-CLIP
Accession: SRP007498
Published: 2011
cell line
gene, gene: sirna, ...
Public Data
6 samples
Transcriptomic analysis of autistic brain reveals convergent molecular pathology [high-throughput sequence data]
Accession: SRP007483
Published: 2011 in Nature
primary tissue
anterior transverse temporal area 41, temporal cortex, ...
autism
Public Data
2 samples
An EMT-driven alternative splicing program occurs in human breast cancer and modulates cellular phenotype.
Accession: SRP007403
Published: 2011 in PLoS Genet
cell line
bioactive entity, gene, ...
breast
breast cancer