Public Data
2 samples
T47D shNT versus T47D shRON
Accession: SRP295532
Published: 2020 in Cancer Lett
cell line
gene, gene: shrna
breast
breast cancer
Public Data
87 samples
Chromatin accessibility associates with protein-RNA correlation in human cancer
Accession: SRP295518
Published: 2020 in Nat Commun
primary tissue
cervical lymph node, lymph node, ...
normal, thyroid cancer
Public Data
14 samples
Synthetic lethality by TET-dioxygenase inhibition
Accession: SRP295483
Published: 2020 in Blood Cancer Discov
cell line
bioactive entity
bone marrow, pleural effusion
acute myeloid leukemia, blast phase chronic myelogenous leukemia, ...
Public Data
30 samples
Precision rescue of SP140 SNP+/+ Crohn's disease patient peripheral blood mononuclear cells responses to lipopolysaccharide using topoisomerase I or II inhibitors
Accession: SRP291527
Published: 2020
primary cells
bioactive entity, infection
blood
Crohn disease
Public Data
24 samples
Regulation and Role of Aryl Hydrocarbon Receptor in Human Embryonic Stem Cells and Their Differentiating Counterparts [RNA-Seq]
Accession: SRP291433
Published: 2020 in Int J Mol Sci
cell line
bioactive entity
blood, endoderm, ...
Sezary syndrome
Public Data
7 samples
ALC1 and PARP activities coordinate chromatin accessibility and viability in homologous recombination deficient cells (RNA-seq)
Accession: SRP257888
Published: 2020
cell line
gene, gene: crispr
colon, eye
colorectal adenocarcinoma
Public Data
52 samples
Copy Number Variation at 16p11.2 Imparts Transcriptional Alterations in Neural Development in an hiPSC-derived Model of Corticogenesis
Accession: SRP247131
Published: 2020 in Elife
organoid, primary cells
developing neuroepithelium_in_vitro_differentiated
Public Data
6 samples
mRNA sequencing analysis of a novel model of 'NAFLD in a Dish'
Accession: SRP223474
Published: 2020 in iScience
cell line
bioactive entity
metabolic dysfunction-associated steatotic liver disease
Public Data
18 samples
A simulated example for testing QueryFuse
Accession: ERP117662
Published: 2020
other
Public Data
4 samples
Liaison between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion-Negative Rhabdomyosarcoma
Accession: SRP221199
Published: 2020 in Nat Commun
cell line
gene, gene: shrna
muscle cell, pelvic region of trunk
rhabdomyosarcoma
Public Data
1 sample
Determination of isoform-specific RNA structure with nanopore long reads
Accession: SRP213925
Published: 2020
cell line
blood
Sezary syndrome
Public Data
8 samples
TRACE-seq: “TRanslatomic” Analysis Captured in Extracellular vesicles using sequencing
Accession: SRP295359
Published: 2020 in iScience
cell line
gene, gene: overexpression
kidney
Public Data
6 samples
Identifying cleaved and noncleaved targets of small interfering RNAs and microRNAs in mammalian cells by SpyCLIP
Accession: SRP249798
Published: 2020 in Mol Ther Nucleic Acids
cell line
gene, gene: shrna
kidney
Public Data
11 samples
CRISPR repair in a preclinical model of Noonan syndrome associated cardiomyopathy II
Accession: SRP249589
Published: 2020 in Circulation
cell line
gene, gene: crispr
heart
Noonan syndrome
Public Data
12 samples
Transcription factor POU3F2 regulates TRIM8 expression contributing to cellular functions implicated in schizophrenia
Accession: SRP242009
Published: 2020 in Mol Psychiatry
primary cells
gene, gene: shrna
progenitor cell