Public Data
540 samples
Identification and interpretation of splicing variants using paired DNA and RNA sequencing in a clinical cohort of patients tested for hereditary cancer predisposition
Accession: SRP388678
Published: 2022
primary cells, primary tissue
blood
Public Data
24 samples
The regulators of peroxisomal acyl-carnitine shuttle CROT and CRAT promote metastasis in melanoma
Accession: SRP387042
Published: 2022
cell line
control, other
zone of skin
melanoma
Public Data
8 samples
transcriptome original data of huamn airway organoids belonging to the Dual-species RNA-seq project
Accession: SRP374330
Published: 2022
organoid
control, infection
nasal cavity epithelium
Public Data
8 samples
RNA seq on NEO2734, CFI-400945 or SASP treated cells
Accession: SRP351626
Published: 2022 in Nat Cancer
cell line
compound, control, ...
liver, lung
liver cancer, lung cancer
Public Data
6 samples
A dual role for the RNA helicase DHX34 in NMD and pre-mRNA splicing and its role in familial AML/MDS (RNA-Seq I)
Accession: SRP377407
Published: 2022 in RNA
cell line
control, sirna
uterine cervix
cervical cancer
Public Data
21 samples
LINE-1 antisense oligonucleotide ameliorate HGPA and WRN aging phenotype.
Accession: SRP364141
Published: 2022 in Sci Transl Med
primary cells
compound, control
zone of skin
Hutchinson-Gilford progeria syndrome, Werner syndrome
Public Data
3 samples
Whole transcriptome analysis of HK1EBV exosome-treated fibroblasts.
Accession: SRP361767
Published: 2022 in J Exp Clin Cancer Res
primary cells
control, infection
nasopharynx
Public Data
17 samples
Effect of depletion of MDMX (aka MDM4) on gene expression in uveal melanoma cell line MEL202
Accession: SRP393452
Published: 2022 in Cancers (Basel)
cell line
shrna, shrna, ...
eye
uveal melanoma
Public Data
40 samples
Cancer patient-specific genome-scale metabolic models predict metabolites associated with somatic mutations
Accession: SRP334331
Published: 2022
primary tissue
bone marrow
blood, renal cell carcinoma
Public Data
6 samples
Graphdiyne oxide nanosheets display anti-leukemia efficacy specifically against DNMT3A-mutant AML cells [RNA-Seq]
Accession: SRP351265
Published: 2022 in Nat Commun
cell line
compound, control
blood
acute myeloid leukemia
Public Data
12 samples
Regulation of chemosensitivity in pancreatic cancer cells
Accession: SRP348371
Published: 2022 in Nat Commun
cell line
compound, control
pancreas
malignant pancreatic neoplasm
Public Data
6 samples
Differential gene expression (DGE) analysis in HeLa cells treated with 20 nM RMD or an equal volume of solvent (DMSO) for 16 hours
Accession: SRP345762
Published: 2022 in Genome Biol
cell line
compound, control
uterine cervix
cervical cancer
Public Data
32 samples
ActD timecourse in HeLa cells, HeLa cells transiently transfected with control (C2) or CPEB4-targeting siRNAs S140 and S181
Accession: SRP345760
Published: 2022 in Genome Biol
cell line
compound, sirna, ...
uterine cervix
cervical cancer
Public Data
58 samples
RNA sequencing of CD11b+ cells isolated from human gut mucosal biopsies of IBD patients
Accession: SRP336051
Published: 2022 in Gastro Hep Adv
primary cells
compound
colon, ileum
Crohn disease, ulcerative colitis
Public Data
6 samples
MUC1-C ACTIVATES THE SET1A/WDR5 COMPASS COMPLEX AND H3K4 TRIMETHYLATION IN CANCER STEM CELLS
Accession: SRP375285
Published: 2022 in Commun Biol
cell line
compound, control
breast
triple-negative breast carcinoma