Public Data
32 samples
RNA sequencing (RNA-SEQ) of WT and LFS patient specific iPSC derived pre-osteoblasts
Accession: SRP115559
Published: 2019 in Proc Natl Acad Sci U S A
primary cells
control, other, ...
mesenchymal stem cell
Li-Fraumeni syndrome
Public Data
10 samples
Transcriptomic analysis to underly the heterogeneity between 4 cellular models derived from patients diagnosed with pediatric high-grade gliomas under controlled atmosphere (modulation of oxygen level).
Accession: SRP113456
Published: 2019 in Cancers (Basel)
cell line
control, other
pons, ventral thalamus
diffuse intrinsic pontine glioma, glioblastoma
Public Data
4 samples
Survival and Proliferation of T-cell Acute Lymphoblastic Leukaemia Depends on mTOR-regulated Glutamine Uptake and EAAT1 Activity
Accession: SRP112711
Published: 2019
cell line
control
blood
T-cell acute lymphoblastic leukemia
Public Data
6 samples
Lineage-specific control of TFIIH by MITF determines transcriptional homeostasis and DNA repair
Accession: ERP112787
Published: 2019 in Oncogene
cell line
sirna
zone of skin
Public Data
12 samples
RNA-seq of human pancreatic cell lines, L3.6pl and BxPC-3, upon knockdown of p63 for 48 hours compared to siControl
Accession: ERP109983
Published: 2019
cell line
control, sirna
pancreas
adenocarcinoma, pancreatic adenosquamous carcinoma
Public Data
8 samples
Transcriptome analysis on TDP43 and SRSF3 downstream genes and binding RNAs in MDA-MB231 cells by Next Generation Sequencing
Accession: SRP104405
Published: 2019 in Proc Natl Acad Sci U S A
cell line
control, shrna
breast
breast cancer
Public Data
34 samples
Fatal Asthma and Non-Asthma Donor-Derived Airway Smooth Muscle Transcriptome Response to Glucocorticoid Treatment
Accession: SRP098649
Published: 2019 in Am J Respir Cell Mol Biol
other, primary cells
compound, control
respiratory basal cell, smooth muscle tissue
asthma
Public Data
12 samples
Methylome, hydroxymethylome, and integrative transcriptome profiling in human CRC tissue and paired normal tissues
Accession: SRP090137
Published: 2019 in Clin Epigenetics
primary tissue
colorectal mucosa
colorectal cancer
Public Data
26 samples
Whole blood RNA sequencing in idiopathic pneumonia syndrome reveals a unique transcriptomic profile compared to ARDS
Accession: SRP078541
Published: 2019 in Respir Res
primary tissue
blood
acute respiratory distress syndrome, Sepsis
Public Data
2 samples
FTO Regulates Activation of Rho GTPases Signaling as N6-methyladenosine RNA Demethylase and an Rhotekin Partner Protein
Accession: SRP076815
Published: 2019
cell line
control, overexpression
uterine cervix
cervical cancer
Public Data
3 samples
Investigation of Rsf1 genomic distribution and effect on gene expression
Accession: SRP076563
Published: 2019 in Proc Natl Acad Sci U S A
cell line
control, sirna
uterine cervix
cervical cancer
Public Data
40 samples
CDK4/6 inhibition sensitizes myeloma to lenalidomide by reducing the MEIS2 to CRBN ratio that accelerates IKZF1 and IKZF3 degradation
Accession: SRP067924
Published: 2019
cell line, primary cells
compound, control
blood, bone marrow
plasma cell myeloma
Public Data
24 samples
RNA-seq profiles after SP-2509 Treatment of LNCaP, C42B, and PC3 cells
Accession: SRP043996
Published: 2019 in Proc Natl Acad Sci U S A
cell line
compound, control
prostate gland
prostate cancer
Public Data
18 samples
Novel genes differentiating Eosinophilic Esophagitis (EoE) from GERD identified by RNA Sequencing
Accession: SRP016519
Published: 2019
primary tissue
esophagus
eosinophilic esophagitis, gastroesophageal reflux disease, ...
Public Data
4 samples
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (PHOX2B)
Accession: SRP174621
Published: 2019 in Sci Rep
cell line
control, shrna, ...
neuroblast (sensu Vertebrata)
neuroblastoma