Public Data
9 samples
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [RNA-Seq]
Accession: SRP194727
Published: 2019 in BMC Bioinformatics
primary tissue
compound, control
breast
breast cancer
Public Data
32 samples
RNA-Seq of human Schneiderian papillomas and associated carcinomas
Accession: SRP171137
Published: 2019 in Head Neck
primary tissue
ethmoid sinus, ethmoid sinus, ...
carcinoma, frontal sinus Schneiderian papilloma
Public Data
8 samples
Therapeutic targeting of KDM1A/LSD1 in Ewing sarcoma engages the ER-stress response II
Accession: SRP106818
Published: 2019 in Mol Cancer Ther
cell line
shrna
muscle cell
Ewing sarcoma
Public Data
36 samples
Therapeutic targeting of KDM1A/LSD1 in Ewing sarcoma engages the ER-stress response I
Accession: SRP106817
Published: 2019 in Mol Cancer Ther
cell line
compound, control
bone cell, humerus, ...
Ewing sarcoma
Public Data
10 samples
mRNA expression profiling in MDA-MB-231 (LM1) cells with a tet-incible MBD2 or p66a knock down, or treated with MBD2-targeting small molecule ABA or APC
Accession: SRP194625
Published: 2019 in Sci Adv
cell line
compound, control, ...
breast
triple-negative breast carcinoma
Public Data
8 samples
KRASG12C inhibition produces a driver-limited state revealing collateral dependencies
Accession: SRP194532
Published: 2019 in Sci Signal
cell line
compound, control
lung
lung cancer
Public Data
24 samples
Inactivation of CFTR by CRISPR/Cas9 alters transcriptional regulation of inflammatory pathways and other networks
Accession: SRP193559
Published: 2019 in J Cyst Fibros
cell line
compound, control
colon
colon adenocarcinoma
Public Data
24 samples
PR attentuation of interferon signaling
Accession: SRP185827
Published: 2019
cell line
compound, compound, ...
breast
breast cancer
Public Data
24 samples
RNA Expression Profile in Patients with Spinocerebellar Ataxia Type 3
Accession: SRP168964
Published: 2019
primary cells
control
blood
Machado-Joseph disease
Public Data
12 samples
Gene expression profiling in two dimensional and extracellular matrix based three-dimensional cultures of lung and breast cancer cells
Accession: SRP194416
Published: 2019
cell line
control, other
breast, lung
breast cancer, lung cancer
Public Data
4 samples
Overexpression of poly(rC) binding protein 2 by alternative cleavage and polyadenylation promotes breast cancer progression via regulating UFD1 and NT5E
Accession: SRP194383
Published: 2019
cell line
control, sirna
breast
breast cancer
Public Data
2 samples
Genome-wde mapping of BRD9 binding sites and gene expression changes upon BRD9 knockdown
Accession: SRP191312
Published: 2019 in Cell Death Dis
cell line
control
uterine cervix
cervical cancer
Public Data
16 samples
SLAM-seq for K562 endogenous mRNA decay
Accession: SRP185835
Published: 2019 in Elife
cell line
control, other
blood
chronic myelogenous leukemia, BCR-ABL1 positive
Public Data
4 samples
Estrogen receptor beta enhances chemotherapy response of GBM cells by down regulating DNA damage response pathways
Accession: SRP165889
Published: 2019 in Sci Rep
cell line
control, overexpression
brain
glioblastoma
Public Data
26 samples
Corrupted coordination of epigenetic modifications leads to diverging chromatin states and transcriptional heterogeneity in chronic lymphocytic leukemia
Accession: SRP158943
Published: 2019 in Nat Commun
primary cells
blood
B-cell chronic lymphocytic leukemia