Public Data
52 samples
Copy Number Variation at 16p11.2 Imparts Transcriptional Alterations in Neural Development in an hiPSC-derived Model of Corticogenesis
Accession: SRP247131
Published: 2020 in Elife
organoid, primary cells
control
developing neuroepithelium_in_vitro_differentiated
Public Data
6 samples
mRNA sequencing analysis of a novel model of 'NAFLD in a Dish'
Accession: SRP223474
Published: 2020 in iScience
cell line
compound, control
metabolic dysfunction-associated steatotic liver disease
Public Data
18 samples
A simulated example for testing QueryFuse
Accession: ERP117662
Published: 2020
other
Public Data
4 samples
Liaison between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion-Negative Rhabdomyosarcoma
Accession: SRP221199
Published: 2020 in Nat Commun
cell line
control, shrna
muscle cell, pelvic region of trunk
rhabdomyosarcoma
Public Data
1 sample
Determination of isoform-specific RNA structure with nanopore long reads
Accession: SRP213925
Published: 2020
cell line
control
blood
Sezary syndrome
Public Data
8 samples
TRACE-seq: “TRanslatomic” Analysis Captured in Extracellular vesicles using sequencing
Accession: SRP295359
Published: 2020 in iScience
cell line
overexpression
kidney
Public Data
6 samples
Identifying cleaved and noncleaved targets of small interfering RNAs and microRNAs in mammalian cells by SpyCLIP
Accession: SRP249798
Published: 2020 in Mol Ther Nucleic Acids
cell line
control, shrna
kidney
Public Data
11 samples
CRISPR repair in a preclinical model of Noonan syndrome associated cardiomyopathy II
Accession: SRP249589
Published: 2020 in Circulation
cell line
crispr
heart
Noonan syndrome
Public Data
12 samples
Transcription factor POU3F2 regulates TRIM8 expression contributing to cellular functions implicated in schizophrenia
Accession: SRP242009
Published: 2020 in Mol Psychiatry
primary cells
control, shrna
progenitor cell
Public Data
32 samples
Quantifying RNA-Protein Interactions Characterizes Recurrent Mutations in RNA Binding Proteins in Cancer
Accession: SRP295178
Published: 2020 in Nat Commun
cell line
control, overexpression, ...
colon, kidney, ...
colorectal cancer, melanoma
Public Data
9 samples
Master regulators and cofactors of human neuronal cell fate specification identified by CRISPR gene activation screens [SingleFactor_RNAseq]
Accession: SRP286927
Published: 2020 in Cell Rep
cell line
control, overexpression
in_vitro_differentiated
Public Data
15 samples
Master regulators and cofactors of human neuronal cell fate specification identified by CRISPR gene activation screens [DualFactor_RNAseq]
Accession: SRP286919
Published: 2020 in Cell Rep
cell line
control, overexpression
in_vitro_differentiated
Public Data
9 samples
Master regulators and cofactors of human neuronal cell fate specification identified by CRISPR gene activation screens [CAS_TF_Orthogonal_RNAseq]
Accession: SRP286665
Published: 2020 in Cell Rep
cell line
crispr
in_vitro_differentiated
Public Data
4 samples
p53 directly represses human LINE1 transposons
Accession: SRP286567
Published: 2020
cell line
control, crispr
leg, zone of skin
amelanotic melanoma
Public Data
6 samples
Identification and Analysis of Dysregulated lncRNA, microRNA and mRNA expression profiles and construction of ceRNA network in THP-1 macrophage infected with Talaromyces marneffei [RNA-seq]
Accession: SRP272680
Published: 2020 in PeerJ
cell line
control, infection
blood
childhood acute myeloid leukemia